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8RCB

W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Reoxidized by exposure to air (in a not degassed drop) for 34 min in the presence of Formate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths64.433, 123.085, 148.138
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution94.670 - 2.110
Rwork0.199
R-free0.24040
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6sdv
RMSD bond length0.003
RMSD bond angle1.212
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]94.6702.280
High resolution limit [Å]2.1102.110
Number of reflections540972705
<I/σ(I)>8.4
Completeness [%]91.2
Redundancy8.9
CC(1/2)0.9960.591
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829324% PEG 3350, 0.1M Tris-HCl pH 8.0, 1M LiCl

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PDB entries from 2024-10-09

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