8RAL
CL3E peptide bound to the I-Ab murine MHC class II receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979181 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 50.057, 76.032, 133.037 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.850 - 2.100 |
Rwork | 0.216 |
R-free | 0.26300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.688 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.850 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.087 | 0.936 |
Rmeas | 0.112 | 1.199 |
Rpim | 0.070 | 0.739 |
Number of reflections | 30076 | 2449 |
<I/σ(I)> | 7.5 | 1.4 |
Completeness [%] | 99.2 | |
Redundancy | 4.3 | |
CC(1/2) | 0.997 | 0.783 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 0.2 M magnesium chloride hexahydrate, 0.1 M sodium acetate pH 5.0, 20% w/v PEG 6000 |