8R8C
Structure of the N-terminal domain of CMA from Cucumis melo in complex with N-acetylgalactosamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-17 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98011 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 36.613, 36.860, 94.813 |
Unit cell angles | 90.00, 99.17, 90.00 |
Refinement procedure
Resolution | 35.680 - 1.550 |
Rwork | 0.163 |
R-free | 0.20400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.893 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.13) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.680 | 1.580 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.052 | 0.496 |
Rmeas | 0.064 | 0.618 |
Rpim | 0.037 | 0.364 |
Number of reflections | 18279 | 4581 |
<I/σ(I)> | 14.4 | 2.9 |
Completeness [%] | 99.7 | |
Redundancy | 5.2 | |
CC(1/2) | 0.998 | 0.857 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 12% Peg Smear Medium 0.1M Mes pH 6.5 5 mM of CaCl2, MgCl2, CsCl2, CdCl2, NiCl2 and Zinc acetate and GalNAc |