8R4Y

Homotrimer for the lumenal domain of Vacuolar Sorting Receptor 1 (VSR1)

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	DIAMOND BEAMLINE I03
Synchrotron site	Diamond
Beamline	I03
Temperature [K]	100
Detector technology	PIXEL
Collection date	2019-07-18
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	0.9796
Spacegroup name	P 21 3
Unit cell lengths	141.477, 141.477, 141.477
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	47.160 - 3.510
R-factor	0.2566
Rwork	0.256
R-free	0.27230
Structure solution method	AB INITIO PHASING
RMSD bond length	0.003
RMSD bond angle	0.488
Data reduction software	XDS (20180409)
Data scaling software	XDS (20180409)
Phasing software	Arcimboldo
Refinement software	PHENIX (1.21.2_5419)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	49.960	3.720
High resolution limit [Å]	3.510	3.510
Number of reflections	12055	1908
<I/σ(I)>	30.14
Completeness [%]	99.7	98.8
Redundancy	16	28.8
CC(1/2)	0.999	0.301

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION	8	277.15	0.1 M Tris pH 8.0, 20% v/v glycerol ethoxylate, 10% v/v tetrahydrofuran
1	VAPOR DIFFUSION	8	277.15	0.1 M Tris pH 8.0, 20% v/v glycerol ethoxylate, 10% v/v tetrahydrofuran