8R0V
SARS-CoV-2 Mpro (Omicron, P132H) in complex with alpha-ketoamide 13b-K at pH 6.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033 |
Spacegroup name | P 1 |
Unit cell lengths | 45.853, 71.803, 85.725 |
Unit cell angles | 84.72, 80.37, 78.39 |
Refinement procedure
Resolution | 44.390 - 2.480 |
R-factor | 0.2119 |
Rwork | 0.210 |
R-free | 0.24710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.127 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.390 | 2.570 |
High resolution limit [Å] | 2.480 | 2.480 |
Number of reflections | 72463 | 7364 |
<I/σ(I)> | 9.21 | |
Completeness [%] | 90.0 | |
Redundancy | 2.2 | |
CC(1/2) | 0.997 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 296 | 0.1 BisTris 25% PEG3350 |