8QWS
Crystal structure of CotB2 variant V80L in complex with alendronate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9766 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.173, 98.514, 107.417 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.160 - 1.600 |
R-factor | 0.1734 |
Rwork | 0.172 |
R-free | 0.20520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ggj |
RMSD bond length | 0.012 |
RMSD bond angle | 1.127 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.700 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 2.540 | |
Rmeas | 0.099 | |
Number of reflections | 86123 | 13768 |
<I/σ(I)> | 16.5 | 1.5 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 13.4 | 13.1 |
CC(1/2) | 0.990 | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 7 % PEG8000, 0.15 M Mgacetate, 10% ethylenglycol |