8QU3
NF-YB/C Heterodimer in Complex with a 13-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-28 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.750, 51.390, 72.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.940 - 1.410 |
R-factor | 0.1672 |
Rwork | 0.166 |
R-free | 0.19910 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.319 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.940 | 1.460 |
High resolution limit [Å] | 1.410 | 1.410 |
Rmerge | 0.061 | 1.789 |
Rpim | 0.012 | 0.402 |
Number of reflections | 31035 | 2923 |
<I/σ(I)> | 26.1 | 1.4 |
Completeness [%] | 93.4 | 89.9 |
Redundancy | 24.8 | 20.3 |
CC(1/2) | 1.000 | 0.747 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293.15 | 100 mM Morpheus Buffer system 3 pH 9.0, 30% (v/v) Morpheus percipitant mix 1, 100 mM Morpheus carboxylic acids. |