Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8QRZ

Microbacterium testaceum C-glucosyl deglycosidase (CGD), wild type

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2023-08-16
DetectorDECTRIS EIGER2 XE CdTe 9M
Wavelength(s)0.61992
Spacegroup nameP 1
Unit cell lengths78.220, 80.410, 82.960
Unit cell angles90.17, 94.39, 106.58
Refinement procedure
Resolution39.910 - 2.000
R-factor0.2373
Rwork0.236
R-free0.28990
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.984
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2902.100
High resolution limit [Å]2.0002.000
Rmerge0.1111.034
Number of reflections12889617550
<I/σ(I)>8.41.5
Completeness [%]98.898.7
Redundancy4.13.9
CC(1/2)0.9950.458
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72930.1 M PIPES pH 7.0, 25% (w/v) PEGSH (PEG SMEAR HIGH), 0.1 M rubidium(I) chloride, 0.1 M magnesium(II) formate

239492

PDB entries from 2025-07-30

PDB statisticsPDBj update infoContact PDBjnumon