8QRY
Crystal structure of the yeast spindle body component Spc98
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2021-08-17 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 28.304, 45.284, 65.569 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.260 - 1.870 |
R-factor | 0.2413 |
Rwork | 0.238 |
R-free | 0.30170 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.045 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.570 | 1.900 |
High resolution limit [Å] | 1.870 | 1.870 |
Rmeas | 0.124 | 0.434 |
Number of reflections | 7339 | 282 |
<I/σ(I)> | 8.7 | |
Completeness [%] | 99.2 | |
Redundancy | 3.3 | |
CC(1/2) | 0.981 | 0.596 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | Morpheus B4: PEG 3350/PEG 1K/MPD (1:1:1) 37.5%, MES/imidazole 0.1M pH 6.5, Morpheus Halides 90 mM |