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8QPS

Deoxyribose-5-phosphate aldolase (DERA) from Geobacillus sp.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-22
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9688
Spacegroup nameP 31
Unit cell lengths57.230, 57.230, 97.030
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.670 - 1.640
R-factor0.1937
Rwork0.192
R-free0.23650
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.870
Data reduction softwarexia2 (0.5.898-g5f4e2fb3-dials-1.14)
Data scaling softwareXSCALE (Mar 15, 2019)
Phasing softwarePHASER (2.8.1)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.6801.700
High resolution limit [Å]1.6401.640
Rmerge0.0570.684
Rmeas0.0720.854
Rpim0.0430.496
Number of reflections428794272
<I/σ(I)>10.11.3
Completeness [%]98.498.3
Redundancy2.562.58
CC(1/2)0.9930.503
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829328% PEG 4000, 0.1 M Tris buffer

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