8QNR
Crystal structure of ancestral L-galactono-1,4-lactone dehydrogenase: G413N variant in complex with L-gulono-1,4-lactone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9655 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.280, 70.026, 69.631 |
Unit cell angles | 90.00, 102.16, 90.00 |
Refinement procedure
Resolution | 48.860 - 2.300 |
R-factor | 0.20731 |
Rwork | 0.203 |
R-free | 0.28311 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.494 |
Data scaling software | Aimless |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.030 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.035 | 0.684 |
Rmeas | 0.043 | 0.833 |
Rpim | 0.024 | 0.469 |
Total number of observations | 64522 | 6604 |
Number of reflections | 22213 | 2314 |
<I/σ(I)> | 8.9 | 1.1 |
Completeness [%] | 92.4 | |
Redundancy | 2.9 | 2.9 |
CC(1/2) | 0.999 | 0.739 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 20% PEG3350, 0.2 M Lithium Nitrate |