Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8QMV

L2 forming RubisCO derived from ancestral sequence reconstruction of the last common ancestor of Form I'' and Form I RubisCOs

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-02
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.6888
Spacegroup nameC 2 2 21
Unit cell lengths121.790, 203.800, 147.370
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.970 - 1.850
R-factor0.1609
Rwork0.161
R-free0.17390
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.666
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]24.97024.9701.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.1130.0341.077
Rmeas0.1170.0361.126
Number of reflections155284182911329
<I/σ(I)>16.04
Completeness [%]99.9
Redundancy13.9
CC(1/2)0.9991.0000.730
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5289Purified enzyme (10 mg/mL) in 25 mM Tricine-NaOH, 75 mM NaCl, pH 8.0 was incubated at 3% (v/v) CO2 in air and 30 degrees C for 1 hour in the presence of 0.3 mM CABP and 4.8 mM MgCl2. The enzyme was then mixed in a 1:1 ratio with 0.1 M TRIS pH 8.5, 0.2 M magnesium chloride, 30 % (v/v) polyethylene glycol 400. The crystals were flash frozen in liquid nitrogen.

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon