8QMH
Crystal structure of RNA G2C4 repeats in complex with small synthetic molecule ANP77
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU PhotonJet-R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-17 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.5406 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 29.343, 45.179, 86.280 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 21.850 - 1.100 |
R-factor | 0.1227 |
Rwork | 0.122 |
R-free | 0.17370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.384 |
Data reduction software | CrysalisPro |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 21.850 | 1.160 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmerge | 0.076 | 0.560 |
Rmeas | 0.081 | 0.617 |
Rpim | 0.025 | 0.254 |
Number of reflections | 23771 | 3417 |
<I/σ(I)> | 26.9 | 4.4 |
Completeness [%] | 99.9 | |
Redundancy | 16.3 | |
CC(1/2) | 0.999 | 0.894 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 292 | 0.08 M NaCl, 0.04 M Na cacodylate trihydrate pH 6.0, 45% v/v MPD, 0.012 M Spermine tetrahydrochloride |