8QMG
Tobacco lectin Nictaba in apo state including I and Eu SAD datasets.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332,2.0664,1.5326 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.506, 145.973, 82.054 |
Unit cell angles | 90.00, 95.95, 90.00 |
Refinement procedure
Resolution | 71.230 - 2.300 |
R-factor | 0.2094 |
Rwork | 0.208 |
R-free | 0.24560 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.557 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | CRANK2 |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 81.610 | 81.610 | 2.440 |
High resolution limit [Å] | 2.300 | 6.880 | 2.300 |
Rmeas | 0.204 | 0.071 | 0.968 |
Number of reflections | 128105 | 2589 | 8055 |
<I/σ(I)> | 8.65 | 26.42 | 1.85 |
Completeness [%] | 94.2 | 98 | 72.4 |
Redundancy | 7.09 | 7.186 | 6.59 |
CC(1/2) | 0.993 | 0.998 | 0.633 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 287 | 91 mM ZnAc, 91 mM ZnCl2, 91 mM Bis-Tris pH 7.5, 18 % Medium PEG smear |