8QDF
Engineered LmrR with Met-89 replaced by para-boronophenylalanine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96546 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.674, 53.890, 69.034 |
Unit cell angles | 90.00, 95.45, 90.00 |
Refinement procedure
Resolution | 43.370 - 2.200 |
R-factor | 0.2101 |
Rwork | 0.206 |
R-free | 0.27740 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.322 |
Data reduction software | xia2 (3.8.6) |
Data scaling software | Aimless (0.7.9) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX ((1.20rc1_4395: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.890 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.082 | 0.376 |
Rmeas | 0.099 | 0.456 |
Rpim | 0.056 | 0.254 |
Total number of observations | 70024 | 6099 |
Number of reflections | 22769 | 1970 |
<I/σ(I)> | 6.8 | 2.3 |
Completeness [%] | 99.7 | |
Redundancy | 3.1 | 3.1 |
CC(1/2) | 0.991 | 0.812 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | Protein was concentrated to 9 mg/ml in 20 mM Tris-HCl, pH 8.0, 280 mM NaCl and 1 mM EDTA. Reservoir solution contained 25% PEG 1500 in 0.1 M malonate/imidazole/boric acid buffer, pH 6.0 |