8Q71
Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the inhibitor GC-67
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-07-16 |
| Detector | DECTRIS EIGER2 S 16M |
| Wavelength(s) | 0.9763 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 44.301, 211.631, 62.947 |
| Unit cell angles | 90.00, 110.67, 90.00 |
Refinement procedure
| Resolution | 105.800 - 2.322 |
| R-factor | 0.2324 |
| Rwork | 0.227 |
| R-free | 0.29010 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.792 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 105.815 | 2.618 |
| High resolution limit [Å] | 2.322 | 2.322 |
| Rmerge | 0.275 | 1.347 |
| Rmeas | 0.310 | 1.505 |
| Rpim | 0.141 | 0.660 |
| Number of reflections | 31387 | 1569 |
| <I/σ(I)> | 5.184 | 1.195 |
| Completeness [%] | 0.7 | 0.1119 |
| Redundancy | 4.8 | |
| CC(1/2) | 0.976 | 0.462 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 289 | 0.1M MES pH6.0, 20% PEG6000, 0.2M Ammonium chloride, 0.4 M GC67 |






