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8Q6D

Anaerobic crystal structure of HIF prolyl hydroxylase 2 (PHD2 181-407) in complex with HIF2alpha-CODD peptide (523-542), Fe(II) and 2-oxoglutarate (2OG)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-17
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9762
Spacegroup nameP 21 2 21
Unit cell lengths38.070, 42.630, 130.750
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.550 - 1.400
R-factor0.1682
Rwork0.167
R-free0.18990
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.899
Data reduction softwarexia2
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.0701.420
High resolution limit [Å]1.4001.400
Number of reflections426511834
<I/σ(I)>19.7
Completeness [%]99.4
Redundancy12.6
CC(1/2)1.0000.800
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29810-35% PEG 4K, 0.2 ammonium acetate, sodium ammonium acetate trihydrate pH (4.1-5.6)

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