8Q4R

Crystal structure of YTHDC1 in complex with Compound 30 (ZA_326)

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SLS BEAMLINE X06DA
Synchrotron site	SLS
Beamline	X06DA
Temperature [K]	100
Detector technology	PIXEL
Collection date	2022-06-17
Detector	DECTRIS PILATUS 2M-F
Wavelength(s)	1
Spacegroup name	P 1 21 1
Unit cell lengths	39.960, 103.710, 42.210
Unit cell angles	90.00, 105.37, 90.00

Refinement procedure

Resolution	40.700 - 1.430
R-factor	0.2127
Rwork	0.211
R-free	0.23580
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.006
RMSD bond angle	0.963
Data reduction software	XDS
Data scaling software	XSCALE
Phasing software	PHASER
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	40.705	1.510
High resolution limit [Å]	1.430	1.430
Number of reflections	59656	9438
<I/σ(I)>	10.48
Completeness [%]	97.1
Redundancy	3.43
CC(1/2)	0.993	0.608

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP		295	25% PEG 3350, 0.2M Ammonium Sulphate, 0.1M Bis-Tris pH 6.5