8PXD
Crystal structure of the C-terminal domain of Hh1412
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.976 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 37.700, 64.480, 119.540 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.954 - 2.200 |
R-factor | 0.1944 |
Rwork | 0.191 |
R-free | 0.25030 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 1.061 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MoRDa |
Refinement software | PHENIX ((1.15.1_3469: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.960 | 35.960 | 2.220 |
High resolution limit [Å] | 2.090 | 6.200 | 2.090 |
Rmerge | 0.210 | 0.143 | 1.324 |
Rmeas | 0.219 | 0.149 | 1.383 |
Number of reflections | 8910 | 393 | 1378 |
<I/σ(I)> | 6.41 | 1.13 | |
Completeness [%] | 99.6 | 97.6 | |
Redundancy | 12.38 | 11.85 | |
CC(1/2) | 0.993 | 0.992 | 0.852 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | Morpheus A4; 0.06 M Divalents, 0.1 M Buffer System 1 6.5, 50 % v/v Precipitant Mix 4 |