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8PVZ

Manganese-dependent transcriptional repressor DR2539 complexed with cadmium

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-06-29
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979330
Spacegroup nameP 43 21 2
Unit cell lengths60.785, 60.785, 187.681
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.600 - 2.000
R-factor0.1873
Rwork0.186
R-free0.22000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.185
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.9202.110
High resolution limit [Å]2.0002.000
Number of reflections247273534
<I/σ(I)>11.4
Completeness [%]99.8
Redundancy5.5
CC(1/2)0.9980.622
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2933% 6-Aminohexanoic acid; 0.1M Hepes pH 7.0; 1.2 M sodium acetate; 0.05M Cadmium sulphate

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PDB entries from 2024-11-13

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