8PRQ
The structure of nvBagel2 in the presence of Cu(II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-20 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 55.792, 55.792, 109.021 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.670 - 1.460 |
R-factor | 0.1956 |
Rwork | 0.194 |
R-free | 0.22550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.038 |
Data reduction software | DIALS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.670 | 1.490 |
High resolution limit [Å] | 1.460 | 1.460 |
Rmerge | 0.064 | 1.365 |
Rmeas | 0.066 | 1.788 |
Rpim | 0.014 | 1.138 |
Total number of observations | 254799 | 472 |
Number of reflections | 14076 | 262 |
<I/σ(I)> | 16.6 | 0.1 |
Completeness [%] | 91.5 | |
Redundancy | 18.1 | 1.8 |
CC(1/2) | 0.997 | 0.678 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 293.15 | 0.075 M HEPES sodium salt pH 7.5, 1.125 M Lithium sulfate, 25 %(v/v) Glycerol |