Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PQT

Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to Bis-Tris

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]298
Detector technologyPIXEL
Collection date2021-03-11
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9795
Spacegroup nameP 62 2 2
Unit cell lengths131.189, 131.189, 86.940
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution69.040 - 1.700
R-factor0.1923
Rwork0.191
R-free0.22510
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.042
RMSD bond angle1.708
Data reduction softwarexia2 (3.3.4)
Data scaling softwarexia2 (3.3.4)
Phasing softwarePHENIX (1.19.2-4158)
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]113.6101.730
High resolution limit [Å]1.7001.700
Rmerge0.1451.626
Rmeas0.1461.654
Rpim0.0200.299
Number of reflections488182409
<I/σ(I)>19.61.3
Completeness [%]100.0100
Redundancy50.929.5
CC(1/2)1.0000.955
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293.159.8 mg/ml enzyme; 22.5% v/v PEG Smear Broad; 0.1 M Bis-Tris pH 7.5; 0.05 M Zinc acetate dihydrate; 0.2 M Lithium sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon