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8PQR

Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 WT bound to DAD_Immucillin-H

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]298
Detector technologyPIXEL
Collection date2022-05-31
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.9795
Spacegroup nameP 32
Unit cell lengths97.280, 97.280, 65.850
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution51.882 - 1.586
R-factor0.1714
Rwork0.170
R-free0.19660
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.922
Data reduction softwareXDS (Built 20220110)
Data scaling softwareautoPROC (1.0.5)
Phasing softwarePHENIX (1.19.2-4158)
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.8821.613
High resolution limit [Å]1.5861.586
Rmerge0.1211.235
Rmeas0.1272.817
Rpim0.0391.082
Number of reflections944104705
<I/σ(I)>8.70.7
Completeness [%]100.099.9
Redundancy10.16.5
CC(1/2)0.9980.400
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293.1528% v/v PEG Smear Broad; 0.1 M Tris pH 8.5; 0.15 M Ammonium Acetate; 0.01 M Calcium chloride dihydrate

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