8PQP
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 D62N Mutant bound to ImmH-Forodesine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 298 |
Detector technology | PIXEL |
Collection date | 2022-05-31 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 93.573, 93.573, 63.124 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.799 - 1.709 |
R-factor | 0.1879 |
Rwork | 0.187 |
R-free | 0.21220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.838 |
Data scaling software | autoPROC (1.0.5) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.800 | 1.740 |
High resolution limit [Å] | 1.709 | 1.710 |
Rmerge | 0.049 | 1.094 |
Rmeas | 0.050 | 2.464 |
Number of reflections | 34700 | 1649 |
<I/σ(I)> | 21.8 | 0.5 |
Completeness [%] | 99.6 | 95.5 |
Redundancy | 16.7 | 6.5 |
CC(1/2) | 1.000 | 0.400 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 28% v/v PEG Smear Broad; 0.1 M Sodium Phosphate pH 6.2; 0.2 M Sodium Chloride |