8PPP
Amide bond synthetase from Streptomyces hindustanus K492H mutant in complex with AMP-CPP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2022-09-16 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.95881 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 82.700, 95.700, 87.200 |
Unit cell angles | 90.00, 117.80, 90.00 |
Refinement procedure
Resolution | 58.190 - 2.570 |
R-factor | 0.21455 |
Rwork | 0.211 |
R-free | 0.27554 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.477 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.190 | 2.680 |
High resolution limit [Å] | 2.570 | 2.570 |
Rmerge | 0.170 | 1.110 |
Rpim | 0.100 | 0.670 |
Number of reflections | 38357 | 4648 |
<I/σ(I)> | 8.5 | 1.7 |
Completeness [%] | 99.8 | |
Redundancy | 6.9 | |
CC(1/2) | 1.000 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.2 M lithium sulfate; 0.1 M HEPES pH 7.5; 25% PEG (w/v) 3350; 4 deg C. |