8POS
Crystal structure of wolbachia leucyl-tRNA synthetase editing domain bound to cmpd9-AMP adduct
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-28 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.87313 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 52.147, 52.147, 273.558 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.510 - 2.137 |
R-factor | 0.2137 |
Rwork | 0.212 |
R-free | 0.25250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.910 |
Data reduction software | autoPROC (1.0.5) |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.224 | 2.386 |
High resolution limit [Å] | 2.137 | 2.137 |
Rpim | 0.040 | 0.478 |
Number of reflections | 15552 | 777 |
<I/σ(I)> | 12.1 | 1.7 |
Completeness [%] | 93.0 | |
Redundancy | 29.5 | |
CC(1/2) | 0.999 | 0.776 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1 M Tris pH 8.5, 0.2 M LiSO4 ; 31% PEG 4000 |