8PNA
transcription factor BARHL2 bound to TAATG DNA sequence
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.8856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.853, 46.881, 71.758 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.250 - 1.450 |
R-factor | 0.1953 |
Rwork | 0.194 |
R-free | 0.22940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 2.513 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.250 | 39.250 | 1.470 |
High resolution limit [Å] | 1.450 | 7.930 | 1.450 |
Rmerge | 0.081 | 0.037 | 1.627 |
Rmeas | 0.086 | 0.040 | 1.907 |
Rpim | 0.029 | 0.014 | 0.966 |
Total number of observations | 189240 | 1353 | 3339 |
Number of reflections | 23842 | 185 | 999 |
<I/σ(I)> | 13.1 | 42.7 | 0.6 |
Completeness [%] | 99.1 | 99.4 | 86.2 |
Redundancy | 7.9 | 7.3 | 3.3 |
CC(1/2) | 0.999 | 1.000 | 0.288 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 293 | PEG 4000, sodium malonate, sodium acetate |