8PML

Structure of Nal1 protein , SPIKE allele from japonica rice, construct 46-458

This is a non-PDB format compatible entry.

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SSRF BEAMLINE BL19U1
Synchrotron site	SSRF
Beamline	BL19U1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2020-06-21
Detector	DECTRIS PILATUS 6M
Wavelength(s)	0.978690
Spacegroup name	P 21 21 2
Unit cell lengths	175.428, 193.360, 84.037
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	87.710 - 2.950
R-factor	0.2074
Rwork	0.205
R-free	0.25200
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.006
RMSD bond angle	1.138
Data reduction software	XDS (BUILT 20200131)
Data scaling software	Aimless (0.7.4)
Phasing software	PHASER
Refinement software	PHENIX (1.21rc1_4903)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	129.924	3.190
High resolution limit [Å]	2.948	2.948
Rmerge	0.236	1.957
Rmeas	0.245	2.035
Rpim	0.067	0.553
Number of reflections	47426	2372
<I/σ(I)>	11	1.5
Completeness [%]	90.4	52.1
Redundancy	13.3	13.5
CC(1/2)	0.997	0.644

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	6.5	298	0.1M MES 10% PEG 5000 MME 10% 1-propanol