8PMG
Structure of Nal1 indica cultivar IR64, construct 36-458
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-13 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.980110 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 173.410, 191.031, 90.253 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.600 - 3.290 |
R-factor | 0.2141 |
Rwork | 0.211 |
R-free | 0.27060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.642 |
Data reduction software | XDS (BUILT 20200417) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 95.516 | 3.468 |
High resolution limit [Å] | 3.290 | 3.292 |
Rmerge | 0.186 | 1.362 |
Rmeas | 0.205 | 1.481 |
Rpim | 0.084 | 0.573 |
Number of reflections | 33531 | 1678 |
<I/σ(I)> | 7.2 | 1.6 |
Completeness [%] | 88.2 | 83.7 |
Redundancy | 5.8 | 6.5 |
CC(1/2) | 0.994 | 0.721 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 298 | 0.05M MES 12% methanol 4% PEG 2000 |