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8PI8

DNA binding domain of HNF-1A bound to P2-HNF4A promoter DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-20
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameP 21 21 21
Unit cell lengths46.703, 55.038, 202.071
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.330 - 2.300
R-factor0.2161
Rwork0.214
R-free0.26070
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.537
Data reduction softwareXDS
Data scaling softwareXSCALE (Jan 10, 2022)
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.3302.360
High resolution limit [Å]2.3002.300
Rmeas0.203
Number of reflections240101724
<I/σ(I)>6.410.6
Completeness [%]99.598.9
Redundancy7.47.8
CC(1/2)0.9940.206
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2810.1 M MMT, pH 4.0, 25% w/v PEG 1500

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PDB entries from 2024-10-09

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