8PEL
Structure of C. thermophilum RNA exosome core
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.99994 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 100.525, 148.385, 195.065 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.900 - 3.810 |
R-factor | 0.2456 |
Rwork | 0.243 |
R-free | 0.29250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.692 |
Data reduction software | XDS (Jan 10, 2022) |
Data scaling software | XSCALE (Jan 10, 2022) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.900 | 3.946 |
High resolution limit [Å] | 3.810 | 3.810 |
Number of reflections | 29143 | 2793 |
<I/σ(I)> | 5.01 | 1.19 |
Completeness [%] | 99.6 | 97.14 |
Redundancy | 13.5 | 13.5 |
CC(1/2) | 0.984 | 0.586 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 0.2M Ammonium Sulphate 0.1M Sodium Acetate pH 5.5 10% PEG MME 2000 |