8PDI
The phosphatase and C2 domains of SHIP1 with covalent Z1763271112
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-24 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.498, 78.993, 89.289 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.163 - 1.300 |
Rwork | 0.146 |
R-free | 0.19050 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.779 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.500 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.096 | |
Rpim | 0.040 | 0.998 |
Number of reflections | 109198 | 5345 |
<I/σ(I)> | 11.6 | 0.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.7 | 12.3 |
CC(1/2) | 1.000 | 0.581 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 30 mM sodium nitrate, 30 mM dibasic sodium phosphate, 30 mM ammonium sulphate, 100 mM MES/imidazole 20 % PEG 500 MME, 10% PEG 20,000 |