8PB5
PsiM in complex with sinefungin and norbaeocystin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-04 |
Detector | DECTRIS EIGER2 X CdTe 16M |
Wavelength(s) | 0.6888 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.211, 78.348, 83.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 12.920 - 0.890 |
R-factor | 0.1394 |
Rwork | 0.139 |
R-free | 0.15150 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.012 |
RMSD bond angle | 1.232 |
Data reduction software | xia2 (3.12.0) |
Data scaling software | xia2 (3.12.0) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 12.920 | 0.922 |
High resolution limit [Å] | 0.890 | 0.890 |
Rmerge | 0.095 | 4.420 |
Rmeas | 0.097 | 4.504 |
Rpim | 0.019 | 0.859 |
Number of reflections | 247003 | 23421 |
<I/σ(I)> | 13.39 | 0.39 |
Completeness [%] | 99.4 | 95.79 |
Redundancy | 26.9 | 27.1 |
CC(1/2) | 0.999 | 0.431 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 277 | 100 mM Tris/HCl pH 8.5, 20% PEG 8000, 200 mM MgCl2 |