8P9Q
Crystal structure of the metallo-beta-lactamase VIM1 with 2455
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I03 |
| Synchrotron site | Diamond |
| Beamline | I03 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-02-19 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97872 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 39.650, 67.880, 40.300 |
| Unit cell angles | 90.00, 93.18, 90.00 |
Refinement procedure
| Resolution | 34.610 - 1.080 |
| R-factor | 0.1273 |
| Rwork | 0.127 |
| R-free | 0.13960 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.200 |
| Data reduction software | xia2 |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 34.610 | 1.110 |
| High resolution limit [Å] | 1.080 | 1.080 |
| Rmerge | 0.043 | 0.361 |
| Rmeas | 0.047 | 0.423 |
| Rpim | 0.018 | 0.216 |
| Number of reflections | 88451 | 5091 |
| <I/σ(I)> | 17.9 | 2.7 |
| Completeness [%] | 97.1 | |
| Redundancy | 97.1 | |
| CC(1/2) | 0.999 | 0.874 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 2.2M ammonium phosphate 0.1M TrisHCl, pH 8.5 |
