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8P87

Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 mM X77, from an "old" crystal.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 11.2C
Synchrotron siteELETTRA
Beamline11.2C
Temperature [K]100
Detector technologyPIXEL
Collection date2021-05-12
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9999
Spacegroup nameP 21 21 21
Unit cell lengths67.848, 101.138, 104.258
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.570 - 1.700
R-factor0.1712
Rwork0.170
R-free0.19140
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle0.931
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]101.1401.730
High resolution limit [Å]1.7001.700
Rmerge0.083
Number of reflections795824157
<I/σ(I)>14.8
Completeness [%]100.0
Redundancy9.1
CC(1/2)0.9990.660
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M Sodium formate, 0.1M Ammonium acetate, 0.1M Sodium citrate tribasic dihydrate, 0.1M Potassium sodium tartrate tetrahydrate, 0.1M Sodium oxamate, 0.1 M Hepes/MOPS pH 7.5, 20% v/v Ethylene glycol, 10 % w/v PEG 8000

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