8P43
Structure of the MHC class Ib molecule Qa-1b in complex with Q001 peptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | MAX IV BEAMLINE BioMAX |
| Synchrotron site | MAX IV |
| Beamline | BioMAX |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-05-22 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97625 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 59.560, 72.797, 96.515 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.690 - 2.430 |
| R-factor | 0.1939 |
| Rwork | 0.191 |
| R-free | 0.24700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.986 |
| Data reduction software | AutoProcess |
| Data scaling software | TRUNCATE |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.690 | 2.517 |
| High resolution limit [Å] | 2.430 | 2.430 |
| Rmerge | 0.034 | 0.255 |
| Rmeas | 0.048 | 0.360 |
| Rpim | 0.034 | 0.255 |
| Number of reflections | 16416 | 1605 |
| <I/σ(I)> | 13.23 | |
| Completeness [%] | 99.9 | 99.88 |
| Redundancy | 2 | 2 |
| CC(1/2) | 0.999 | 0.895 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 8% PEG4000, 0.1M sodium acetate (pH 5.7) and 10 mM NiCl2 |






