8OYW
De novo designed rhomboid protease-like fold RPF_9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.720, 66.680, 73.390 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.350 - 1.500 |
R-factor | 0.1984 |
Rwork | 0.198 |
R-free | 0.21630 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.670 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.350 | 1.554 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.081 | 1.196 |
Number of reflections | 32093 | 3164 |
<I/σ(I)> | 11.8 | 1.45 |
Completeness [%] | 99.6 | 99.72 |
Redundancy | 8.1 | 7.5 |
CC(1/2) | 0.998 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 277.15 | 0.1 M HEPES pH 7.8, 0.15 M sodum citrate tribasic dihydrate, 25% v/v PEG smear low |