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8OJ2

Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2019-09-12
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0722
Spacegroup nameI 21 21 21
Unit cell lengths79.622, 79.682, 146.297
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.320 - 2.560
R-factor0.2221
Rwork0.220
R-free0.26600
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.641
Data reduction softwareautoPROC (1.0.5)
Data scaling softwareautoPROC (1.0.5)
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]73.1482.747
High resolution limit [Å]2.5582.558
Rmerge0.1232.670
Rmeas0.129
Number of reflections12755638
<I/σ(I)>12.8
Completeness [%]91.341.8
Redundancy12.3
CC(1/2)0.9950.448
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2911 ul of protein at 4.6mg/ml in 15mM Hepes pH7.5, 150mM NaCl, 20mM DTT were mixed with 1 ul reservoir (0.2M Ammonium sulfate, 0.1M MES pH6.5, 24% PEG 3350) and equilibrated against 80 ul reservoir

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