8OHY
Native Structure of Dictyostelium discoideum dye-decolorizing peroxidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 99.880, 99.880, 73.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.670 - 1.950 |
R-factor | 0.2062 |
Rwork | 0.204 |
R-free | 0.24980 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.658 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20-4459_9999: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.670 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.272 | 4.643 |
Number of reflections | 27351 | 2472 |
<I/σ(I)> | 12.02 | 0.6 |
Completeness [%] | 98.5 | 91.55 |
Redundancy | 26.7 | 26 |
CC(1/2) | 0.999 | 0.411 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | HEPES-NaOH, PEG 6000, ZnCl |