8OFQ
Human adenovirus type 25 fiber-knob protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-17 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | H 3 |
Unit cell lengths | 126.552, 126.552, 251.444 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 82.610 - 1.600 |
R-factor | 0.17342 |
Rwork | 0.172 |
R-free | 0.19791 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.499 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.620 | 1.640 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.071 | 1.284 |
Rmeas | 0.078 | 1.418 |
Rpim | 0.045 | 0.815 |
Number of reflections | 198233 | 14640 |
<I/σ(I)> | 11.2 | 1.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 5.8 | 5.6 |
CC(1/2) | 0.999 | 0.484 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 0.1 M SPG buffer, 25 % w/v PEG 1500 |