8OF6
Structure of YtoQ
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97873 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 137.340, 70.150, 149.940 |
Unit cell angles | 90.00, 98.91, 90.00 |
Refinement procedure
Resolution | 49.450 - 2.100 |
R-factor | 0.2294 |
Rwork | 0.227 |
R-free | 0.26810 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.104 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 9.390 | 2.150 |
High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
Rmerge | 0.201 | 0.074 | 2.013 |
Rmeas | 0.212 | 0.079 | 2.112 |
Number of reflections | 163135 | 3476 | 11909 |
<I/σ(I)> | 9.15 | ||
Completeness [%] | 98.8 | ||
Redundancy | 10.3 | ||
CC(1/2) | 0.996 | 0.997 | 0.601 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 0.1 M Tris/HCl pH 8.0 2 M Ammonium sulfate |