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8KI0

Crystal structure of the hemophore HasA from Pseudomonas protegens Pf-5 capturing Fe-tetraphenylporphyrin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-01-30
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.000
Spacegroup nameP 1 21 1
Unit cell lengths33.561, 158.717, 33.534
Unit cell angles90.00, 97.58, 90.00
Refinement procedure
Resolution39.680 - 1.450
R-factor0.12065
Rwork0.119
R-free0.15178
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.540
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]39.68039.6801.530
High resolution limit [Å]1.4504.3101.450
Rmerge0.0760.0550.374
Rmeas0.0820.0590.414
Number of reflections5903423588784
<I/σ(I)>16.0833.484.38
Completeness [%]95.599.787.7
Redundancy6.54
CC(1/2)0.9980.9970.907
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7293100 mM Tris-HCl (pH 7.0), 1.0 M Potassium sodium tartrate, 200 mM Lithium sulfate

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PDB entries from 2024-05-15

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