8JZG
C. glutamicum S-adenosylmethionine synthase co-crystallized with Adenosine, triphosphate, and SAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-10-22 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 61.311, 116.806, 116.314 |
Unit cell angles | 90.00, 103.31, 90.00 |
Refinement procedure
Resolution | 32.630 - 2.390 |
R-factor | 0.1983 |
Rwork | 0.194 |
R-free | 0.26040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tde |
RMSD bond length | 0.010 |
RMSD bond angle | 1.700 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.440 |
High resolution limit [Å] | 2.390 | 6.510 | 2.400 |
Rmerge | 0.080 | 0.048 | 0.359 |
Rmeas | 0.093 | 0.056 | 0.432 |
Rpim | 0.048 | 0.029 | 0.235 |
Number of reflections | 62235 | 3162 | 3083 |
<I/σ(I)> | 11.4 | ||
Completeness [%] | 99.3 | 98.3 | 99.1 |
Redundancy | 3.6 | 3.7 | 3.2 |
CC(1/2) | 0.990 | 0.995 | 0.781 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | PEG 3350, Sodium phosphate monobasic monohydrate |