8JVC
Crystal structure of dephospho-coenzyme A kinase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 58.246, 58.246, 105.137 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.220 - 2.150 |
Rwork | 0.197 |
R-free | 0.23330 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.621 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | SHARP |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.220 | 2.220 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.107 | 0.372 |
Rmeas | 0.110 | 0.380 |
Rpim | 0.022 | 0.075 |
Number of reflections | 10444 | 873 |
<I/σ(I)> | 24.9 | 11.3 |
Completeness [%] | 100.0 | |
Redundancy | 25.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | PEG 3350, Bis-Tris (pH 6.5) |