8JUS
Crystal structure of aspartate semialdehyde dehydrogenase from Porphyromonas gingivalis complexed with 2',5'adenosine diphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2023-05-02 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9796 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 74.990, 108.220, 160.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.770 - 1.730 |
R-factor | 0.1854 |
Rwork | 0.184 |
R-free | 0.20650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.115 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.770 | 1.790 |
High resolution limit [Å] | 1.730 | 1.730 |
Number of reflections | 68236 | 6742 |
<I/σ(I)> | 29.89 | 7.46 |
Completeness [%] | 100.0 | |
Redundancy | 13.6 | 13.4 |
CC(1/2) | 1.000 | 0.980 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 296 | 0.2 M Ammonium sulfate, 0.1M HEPES pH 7.5, 25% (w/v) PEG 3350 |