8JJQ
Structure of SenB in complex with UDP-GalNAc at 1.64 Angstroms resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 108.114, 56.377, 108.130 |
Unit cell angles | 90.00, 91.01, 90.00 |
Refinement procedure
Resolution | 49.990 - 1.640 |
R-factor | 0.17691 |
Rwork | 0.176 |
R-free | 0.19542 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.968 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.990 | 1.670 |
High resolution limit [Å] | 1.640 | 1.640 |
Number of reflections | 157933 | 6787 |
<I/σ(I)> | 13.2 | 2.2 |
Completeness [%] | 98.8 | |
Redundancy | 6.2 | |
CC(1/2) | 0.997 | 0.655 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.153 | 20% PEG 5000-MME, 0.1M Bis-Tris pH 6.5 |