8JI2
Crystal structure of AetD in complex with 5,7-dibromo-L-tryptophan
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-19 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.9998 |
Spacegroup name | P 41 |
Unit cell lengths | 65.227, 65.227, 116.859 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.640 - 1.750 |
R-factor | 0.17372 |
Rwork | 0.171 |
R-free | 0.21945 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.673 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 1.810 |
High resolution limit [Å] | 1.750 | 3.770 | 1.750 |
Rmerge | 0.043 | 0.030 | 0.648 |
Rmeas | 0.049 | 0.035 | 0.730 |
Rpim | 0.024 | 0.018 | 0.333 |
Total number of observations | 209153 | ||
Number of reflections | 48871 | 4917 | 4905 |
<I/σ(I)> | 18.9 | ||
Completeness [%] | 99.7 | 98.6 | 100 |
Redundancy | 4.3 | 3.7 | 4.6 |
CC(1/2) | 0.999 | 0.998 | 0.808 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.01 M nickel chloride, 20% PEG 2000 MME, 0.1 M Tris, pH 8.5 |