8JFJ
Crystal structure of enoyl-ACP reductase FabI from Helicobacter pylori
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9875 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 265.762, 68.344, 88.163 |
Unit cell angles | 90.00, 108.59, 90.00 |
Refinement procedure
Resolution | 41.430 - 1.800 |
R-factor | 0.1929 |
Rwork | 0.192 |
R-free | 0.20610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ycs |
RMSD bond length | 0.017 |
RMSD bond angle | 1.716 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.187 | 0.167 | 0.494 |
Rmeas | 0.202 | 0.180 | 0.539 |
Rpim | 0.077 | 0.068 | 0.213 |
Total number of observations | 925686 | ||
Number of reflections | 136674 | 14177 | 13350 |
<I/σ(I)> | 4.7 | ||
Completeness [%] | 98.4 | 99.7 | 97.2 |
Redundancy | 6.8 | 6.8 | 6.3 |
CC(1/2) | 0.940 | 0.964 | 0.905 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.2 M ammonium sulfate, 15% w/v PEG 4000 |