8JEB
Crystal structure of CGL1 from Crassostrea gigas, mannotetraose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man(alpha)1-6Man)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 90 |
Detector technology | PIXEL |
Collection date | 2021-11-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 76.400, 82.495, 44.201 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.201 - 1.300 |
Rwork | 0.156 |
R-free | 0.17450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.655 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.201 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.053 | 0.747 |
Number of reflections | 68918 | 3007 |
<I/σ(I)> | 22.9 | |
Completeness [%] | 99.2 | |
Redundancy | 12.5 | |
CC(1/2) | 1.000 | 0.837 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.2 M magnesium acetate, 0.1 M sodium cacodylate (pH 6.5), 20% PEG 8000 |