8JDD
Crystal structure of H405A mLDHD in apo form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL02U1 |
| Synchrotron site | SSRF |
| Beamline | BL02U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-04-17 |
| Detector | DECTRIS EIGER2 S 9M |
| Wavelength(s) | 0.9792 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 80.970, 103.400, 122.180 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.750 - 1.550 |
| R-factor | 0.1712 |
| Rwork | 0.170 |
| R-free | 0.18690 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.045 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 63.750 | 1.590 |
| High resolution limit [Å] | 1.550 | 1.550 |
| Rmerge | 0.062 | 0.613 |
| Rmeas | 0.064 | 0.695 |
| Rpim | 0.018 | 0.314 |
| Total number of observations | 806063 | 21550 |
| Number of reflections | 73286 | 4764 |
| <I/σ(I)> | 21.4 | 2.7 |
| Completeness [%] | 98.5 | |
| Redundancy | 11 | 4.5 |
| CC(1/2) | 0.999 | 0.721 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 289 | 4.0 M sodium formate |






